BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A04SP1|AL427554
(1016 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1291 1750 0.0
>3x_Contig1291
Length = 6514
Score = 1750 bits (876), Expect = 0.0
Identities = 1002/1031 (97%), Gaps = 17/1031 (1%)
Strand = Plus / Plus
Query: 2 tccaaaatgccggtgtatgagcggtgacttttctccttgaatgagctgttgcatgtcaag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3189 tccaaaatgccggtgtatgagcggtgacttttctccttgaatgagctgttgcatgtcaag 3248
Query: 62 cattgtttttggccattgttttctttattctttgccacttgaacaaagttgaaaattttt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3249 cattgtttttggccattgttttctttattctttgccacttgaacaaagttgaaaattttt 3308
Query: 122 ggatgtcgtttagtactgcaatacgtatgahatgatagggatctgctatgcattcgagaa 181
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3309 ggatgtcgtttagtac-gcaatacgtatgaaatgatagggatctgctatgcattcgagaa 3367
Query: 182 tagcggaacgtacttatgtccgtcatcgcaagaagcatactatttaactgatggttaatt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3368 tagcggaacgtacttatgtccgtcatcgcaagaagcatactatttaactgatggttaatt 3427
Query: 242 acttgaatatttccatctgattttactttgataggtgataaggattttgaataagatgtg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3428 acttgaatatttccatctgattttactttgataggtgataaggattttgaataagatgtg 3487
Query: 302 aggaaatatatagtcagtactaagacacgtatccattttattttgttttataagaggaat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3488 aggaaatatatagtcagtactaagacacgtatccattttattttgttttataagaggaat 3547
Query: 362 cgaaattaggaaaacattttggataatgacttcttctgtttagcaatcaactcctttttg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3548 cgaaattaggaaaacattttggataatgacttcttctgtttagcaatcaactcctttttg 3607
Query: 422 gctttcttggcgtcttgtaaagcctttataattgcagtatcatgtggttggtatgtagta 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3608 gctttcttggcgtcttgtaaagcctttataattgcagtatcatgtggttggtatgtagta 3667
Query: 482 gccaattcgaggtctgtcacggccatttctgcgttttttgtgtagtaataagctaaacca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3668 gccaattcgaggtctgtcacggccatttctgcgttttttgtgtagtaataagctaaacca 3727
Query: 542 cggcgatacaatgccttggccttggatttatcgtctktgttgtcagcatgaagggcttca 601
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3728 cggcgatacaatgccttggccttggatttatcgtctgtgttgtcagcatgaagggcttca 3787
Query: 602 gtggcggcgctaagtgttctactgtwatttttactcttgagagacaccaaagcgatgttc 661
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3788 gtggcggcgctaagtgttctactgtaatttttactcttgagagacaccaaagcgatgttc 3847
Query: 662 aagaataaggatacccttwatgcgtcaatttttttwacatcctcctctggtaaatcttga 721
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3848 aagaataaggatacccttaatgcgtcaatttttttaacatcctcctctggtaaatcttga 3907
Query: 722 gggaagtactgcttaagcatttgactacttttttcatatttcacaagggctacttcaaaa 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3908 gggaagtactgcttaagcatttgactacttttttcatatttcacaagggctacttcaaaa 3967
Query: 782 tttttctccttgaattgtttagtaccgatctcttttactgcttctacagcgttcaagaca 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3968 tttttctccttgaattgtttagtaccgatctcttttactgcttctacagcgttcaagaca 4027
Query: 842 ctattgacgtcgttgggatc-amcttcgaatcgtctgttata-tttcttcataattgtca 899
|||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||
Sbjct: 4028 ctattgacgtcgttgggatcaaccttcgaatcgtctgttatattttcttcataattgtca 4087
Query: 900 -catacgcatcagtcgg-rtygc-tct-satctgc-ggaacagtat-awcggatggt-am 952
|||||||||||||||| | || ||| |||||| |||||||||| | |||||||| |
Sbjct: 4088 ccatacgcatcagtcggagtcgcttctgcatctgcaggaacagtataatcggatggtaac 4147
Query: 953 aca-cacaatcctcaattttaa-ctctttgg-cggcttwtcag-ttca-ctgtagcat-- 1005
||| |||||||||||||||||| |||||||| |||||| |||| |||| |||||||||
Sbjct: 4148 acaccacaatcctcaattttaacctctttggccggcttatcagcttcatctgtagcatta 4207
Query: 1006 ttttctatagt 1016
|||||||||||
Sbjct: 4208 ttttctatagt 4218
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7150
Number of Sequences: 1807
Number of extensions: 7150
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 1016
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1000
effective length of database: 10,329,639
effective search space: 10329639000
effective search space used: 10329639000
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)